PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thecc1EG011845t1
Common NameTCM_011845
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
Family bZIP
Protein Properties Length: 463aa    MW: 50732.7 Da    PI: 5.9555
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thecc1EG011845t1genomeCGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.15.1e-10174212543
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43 
                       k  rr+++NReAAr+sR+RKka++++Le+    L++  +
  Thecc1EG011845t1 174 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLTQLEQ 212
                       788*************************97666655554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.0E-7167217No hitNo description
SMARTSM003384.7E-9170241IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415172216IPR004827Basic-leucine zipper domain
PfamPF077169.8E-7172216IPR004827Basic-leucine zipper domain
CDDcd147082.17E-25174226No hitNo description
SuperFamilySSF579599.64E-7174217No hitNo description
PROSITE patternPS000360177192IPR004827Basic-leucine zipper domain
PfamPF141441.4E-31259332IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    Send to blast
MQSFKAAAPT NPDMFCHTSF FLRGEDCNSR HQTRFSDLGE LDHPASAFQH DDAVDLSPSS  60
IFSLKSSNVA VVANSFNYGS LNTSIGATEI VSSGTGCLDT GQFMYQKGTT FGASLGNGHI  120
ENWADSGLAD NSQQTDTSTD VDNDDKNQLN GVRHGAIITV DSVDESKPKT GDQKTLRRLA  180
QNREAARKSR LRKKAYVQQL ENSRLRLTQL EQELQRARQQ GIFISSGLSG DHGHSVAGNG  240
ALAFDMDYAH WLDDHQRLIN DLRSAVNSHM GDNELRILVE GVMAHYDEVF RLKSIGAKAD  300
VFHMLSGMWK TPAERCFMWL GGFRSSELLK ILGNHLEPLT DQQLMGICNL QQSSQQAEDA  360
LSQGMEALQQ SLVDTLSSAC LGPAGSGNVA DYMGQMAIAM GKLATLENFL HQADLLRQQT  420
LQQMHRILTT RQAARALLVI SDYTSRLRAL SSLWCLEGDG EA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007046280.10.0BZIP transcription factor family protein isoform 1
SwissprotQ9SX270.0PAN_ARATH; Transcription factor PERIANTHIA
TrEMBLA0A061ECH80.0A0A061ECH8_THECC; BZIP transcription factor family protein isoform 1
STRINGPOPTR_0008s11710.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM66728133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.11e-175bZIP family protein
Publications ? help Back to Top
  1. Motamayor JC, et al.
    The genome sequence of the most widely cultivated cacao type and its use to identify candidate genes regulating pod color.
    Genome Biol., 2013. 14(6): p. r53
    [PMID:23731509]